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  1. lncRNA-Annotation-nf lncRNA-Annotation-nf Public

    A Nextflow lncRNA Annotation Pipeline based on STAR, Cufflinks and FEELnc

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  2. tuxedo-nf tuxedo-nf Public

    A Nextflow implementation of the Tuxedo Suite of Tools: HISAT, StringTie & Ballgown

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  3. concTree concTree Public

    Using Alignment Uncertainty from Many Multiple Sequence Alignments to Create Consensus Trees

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  4. vast-tools-nf vast-tools-nf Public

    A Nextflow Implementation of VAST-TOOLS for profiling alternative splicing events in RNA-Seq data

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  5. nf-module-demo nf-module-demo Public

    Demo for Nextflow modules and components proposal

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  6. nf-toxomix nf-toxomix Public

    OpenRiskNet pipeline for TGX case study: toxicology predictions based on transcriptomic profiles

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